Fill the entire thing with Organic Mortar Paste (do not allow into contact with skin AT ALL).

I've heard of what it does to organic molecules, whether living, dead or inert; so I assume that if the stink is a molecular problem, this will fix it.

Remove the viscous, highly corrosive (to tissue) block of paste from the cargo hold after a few days with some nano-solvent.

It is probably cheaper just to self destruct the poor vessel, claim insurance and put it towards a more recently constructed vessel.

And this is why I make sure every ship I fly is new, built myself, or by someone I trust. The very thought of flying something that someone else has touched is off putting to me.

It isn't a good idea to buy them from the market when you don't know where they've been. If it's in that state on the outside, then I hate to think what condition the systems are in. Even if you are into buying other people's leftovers, the previous owner obviously didn't take care of that cruiser. There could be a lot else that's wrong besides the smell.

Sell it, buy some minerals and materials, then find somebody to build you a new one.

If you make use of a well ventilated garbage disposal you could always use the Fedo to clean up behind you.

Mind you, if you're bothered with smell you might not want to use these little creatures. But as said, ventilate the area well, make sure it is on a closed circuit and your ship will remain quite clean. They do wonders on my barge.

I came here thinking Ms. Ji-Juong was going to ask capsuleers(or clone soldiers) to clean her ship for him in exchange for payment like some errand boy.

I leave disappointed.

What's wrong with you people, is this the throwaway generation or what. It's a spaceship costing millions of ISK, you don't just change it over for another one like a bent plastic fork.

Why not?

It's a spaceship costing millions of ISK after all. If I am to spend that much, I am going to make damned sure that I am happy with my purchase. If you mend and make do, you only end up paying out more in time and ISK to set things right.

Well, if that's how you want to live, whatever floats your boat.

Out of interest, do you dig in the bin for plastic forks as well?

Quafe.

Genius. You win the thread.

I know.

Now now. Don't get all proud of yourself or I'll retract your thread-winning status and give it to Ms Happy Ending.

Quaf-

What, Anslo?! Are you trying to become a Quafegirl too?!

I got it for a bargain basement price (otherwise I wouldn't have been able to afford it at all) and it's because the cargo hold was so soiled. There were all these blood stains and bits of offal left in there from I-don't-know-what-went-down and I figured I could just clean all that up, but even after my crew got to it with the industrial cleaning gear there's still this residual stink and it's really annoying me (and before you haters say "it's the pilot" my other ships don't smell like this so shut up).

There's a small corporation based off Mabnen's Emperor Family, it's called Monocle Dispositions. I've heard they do miracles disposing of... well, anything. So I'm sure they might help.

I can direct you to a vendor of medical-grade disinfectants and solvents, if you like, ma'am. Naalox is particularly effective. Your sanitation engineers will need their hazmat suits if they are doing an entire cargo bay however.

Quaf-

What, Anslo?! Are you trying to become a Quafegirl too?!

Bathe yourself in Nanite paste.

Box it, sell it, buy a new one.

Just as a word of caution, I would not spend any more time in that ship until a toxology expert has determined that the ship is not currently poisoning you. Biological agents (or whatever might have killed the original occupants) can be extremely dangerous, and hazardous chemicals do not necessarily leave behind a smell.
Depending on the toxologist, the cleaning supplies and expenses, and the time this could take, you might be better off reselling it and purchasing a new one.

After you get it cleaned out, you need to get a priest in there to exorcise your cargo bay.

Otherwise, your crew members will disappear one by one only for others to stumble upon their horribly mutilated body. This negatively effects workplace morale.

No. It's just strong enough to clean tough stains.

Good for cleaning, bad for drinking.

So be it.

When you find crewmember giblets decorating your freshly cleaned walls, don't say I didn't warn you.